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G

get(int) - Method in class net.talvi.puffinplot.data.CustomFields
Gets the value of a specified custom field.
get(String) - Method in class net.talvi.puffinplot.IdToFileMap
Return the directory associated with an identifier.
get2gProtocol() - Method in class net.talvi.puffinplot.PuffinPrefs
Returns the measurement protocol used when opening 2G data files.
getA95() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
 
getA95() - Method in class net.talvi.puffinplot.data.ArasonLevi
 
getA95() - Method in interface net.talvi.puffinplot.data.FisherParams
Returns the alpha-95 value denoting the 95% confidence interval.
getA95() - Method in class net.talvi.puffinplot.data.FisherValues
 
getA95() - Method in class net.talvi.puffinplot.data.GreatCircles
 
getActions() - Method in class net.talvi.puffinplot.PuffinApp
Returns the actions associated with this PuffinApp.
getAfX() - Method in class net.talvi.puffinplot.data.TreatmentStep
For AF or ARM treatment, returns the x-axis AF field strength in tesla.
getAfY() - Method in class net.talvi.puffinplot.data.TreatmentStep
For AF or ARM treatment, returns the y-axis AF field strength in tesla.
getAfZ() - Method in class net.talvi.puffinplot.data.TreatmentStep
For AF or ARM treatment, returns the z-axis AF field strength in tesla.
getAll() - Method in class net.talvi.puffinplot.data.SuiteCalcs.Means
 
getAllSamplesInSelectedSites() - Method in interface net.talvi.puffinplot.plots.PlotParams
 
getAllSamplesInSelectedSites() - Method in class net.talvi.puffinplot.PuffinApp
Gets all the samples in all the sites having at least one selected sample.
getAms() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's AMS tensor.
getAmsBootstrapParams() - Method in class net.talvi.puffinplot.data.Suite
Returns the parameters of the last AMS bootstrap statistics (if any) calculated on this suite's data.
getAmsHextParams() - Method in class net.talvi.puffinplot.data.Suite
Returns the parameters of the last AMS Hext statistics (if any) calculated on this suite's data.
getAntiZoom() - Method in class net.talvi.puffinplot.window.GraphDisplay
Returns the inverse transform of the zoom transform.
getAppDataDirectory() - Static method in class net.talvi.puffinplot.Util
Return a directory where PuffinPlot can store files for "internal" use.
getArea() - Method in class net.talvi.puffinplot.data.TreatmentStep
For continuous measurements, returns the cross-sectional area of the core.
getArmAxis() - Method in class net.talvi.puffinplot.data.TreatmentStep
For ARM treatment, returns the axis of the ARM field.
getArmField() - Method in class net.talvi.puffinplot.data.TreatmentStep
For ARM treatment, returns the ARM bias field strength.
getAxis(int) - Method in class net.talvi.puffinplot.data.Tensor
Returns one of the tensor's three principal axes as a vector.
getAxisLabel() - Method in enum net.talvi.puffinplot.data.TreatmentType
Returns the axis label to use when plotting a graph involving this treatment.
getBuildProperty(String) - Method in class net.talvi.puffinplot.PuffinApp
Reads values from the build.properties file.
getByHeading(String) - Static method in enum net.talvi.puffinplot.data.TreatmentParameter
Returns the field whose heading string is the specified string, or null if no such field exists.
getCentre() - Method in interface net.talvi.puffinplot.plots.PlotPoint
 
getCirclePoints(Correction) - Method in class net.talvi.puffinplot.data.Sample
Returns the magnetic moment vectors used for the current great-circle fit.
getCircles() - Method in class net.talvi.puffinplot.data.GreatCircles
Returns the great circles which were originally supplied to the constructor.
getColumnHeader() - Method in enum net.talvi.puffinplot.data.MeasurementType
Returns a suitable column header for sample identifiers.
getColumnMap() - Method in class net.talvi.puffinplot.data.file.FileFormat
 
getColumnWidthsAsString() - Method in class net.talvi.puffinplot.data.file.FileFormat
 
getCommaSeparatedHeader() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
 
getCommaSeparatedHeader() - Method in interface net.talvi.puffinplot.data.SampleRpiEstimate
 
getCommaSeparatedHeader() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getCompassDir() - Method in enum net.talvi.puffinplot.plots.Direction
 
getComponent(MeasurementAxis) - Method in class net.talvi.puffinplot.data.Vec3
Returns a specified component of this vector.
getControlPanel() - Method in class net.talvi.puffinplot.window.MainWindow
Returns the control panel for the plots displayed in this window.
getCorrection() - Method in interface net.talvi.puffinplot.plots.PlotParams
Returns the correction to be applied to magnetic moment data.
getCorrection() - Method in class net.talvi.puffinplot.PuffinApp
Returns the correction currently being applied to the data displayed by this PuffinApp.
getCorrection() - Method in class net.talvi.puffinplot.window.ControlPanel
Returns the correction to apply to magnetic moment data.
getCreator() - Method in class net.talvi.puffinplot.data.Suite
Returns a string identifying the program and version which created this suite.
getCurrentlyPrintingSample() - Method in class net.talvi.puffinplot.window.MainGraphDisplay
If printing is in progress, return the sample which is currently being printed.
getCurrentPageFormat() - Method in class net.talvi.puffinplot.PuffinApp
Returns the current page format.
getCurrentSample() - Method in class net.talvi.puffinplot.data.Suite
Returns the current sample
getCurrentSample() - Method in class net.talvi.puffinplot.PuffinApp
Gets the currently displayed Sample
getCurrentSampleIndex() - Method in class net.talvi.puffinplot.data.Suite
Returns the index defining the current sample.
getCurrentSite() - Method in class net.talvi.puffinplot.PuffinApp
Returns the site for which data is currently being displayed.
getCurrentSuite() - Method in class net.talvi.puffinplot.PuffinApp
Returns the currently displayed Suite.
getCustomFlagNames() - Method in class net.talvi.puffinplot.data.Suite
Returns the names (titles) of the custom flags for this suite.
getCustomFlags() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's custom flags.
getCustomNoteNames() - Method in class net.talvi.puffinplot.data.Suite
Returns the names (titles) of the custom notes for this suite.
getCustomNotes() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's custom notes.
getDashedStroke() - Method in class net.talvi.puffinplot.plots.Plot
Returns the default dashed stroke style.
getDateString() - Method in class net.talvi.puffinplot.Version
 
getDecDeg() - Method in class net.talvi.puffinplot.data.Vec3
Returns this vector's declination in degrees.
getDecimalFormatSymbols() - Static method in class net.talvi.puffinplot.Util
Return symbols for formatting decimal numbers for on-screen display.
getDecRad() - Method in class net.talvi.puffinplot.data.Vec3
Returns this vector's declination in radians.
getDefaultValue() - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
Returns a default value for the option.
getDefaultValue() - Method in class net.talvi.puffinplot.data.file.SimpleOptionDefinition
 
getDefaultValue() - Method in enum net.talvi.puffinplot.data.TreatmentParameter
Returns this field's default value.
getDemagLevel() - Method in class net.talvi.puffinplot.data.MedianDestructiveField
Returns the treatment level at which the intensity of the sample's magnetic moment reached half of its initial value.
getDepth() - Method in class net.talvi.puffinplot.data.Sample
Returns the depth of a this sample within a continuous long core, where applicable.
getDepth() - Method in class net.talvi.puffinplot.data.TreatmentStep
For continuous measurements, returns the depth of this measurement within the core.
getDepthIndex() - Method in class net.talvi.puffinplot.window.SampleChooser
For long core suites, returns the current depth index.
getDescription() - Method in class net.talvi.puffinplot.data.Correction
Returns a user-friendly string describing this correction.
getDescription() - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
 
getDescription() - Method in class net.talvi.puffinplot.data.file.SimpleOptionDefinition
 
getDimensions() - Method in class net.talvi.puffinplot.plots.Plot
Returns the dimensions of this plot.
getDimensionsAsString() - Method in class net.talvi.puffinplot.plots.Plot
Returns a string representation of this plot's dimensions.
getDipDeg() - Method in class net.talvi.puffinplot.data.Vec3
Returns the strike of the plane normal this vector
getDirection() - Method in enum net.talvi.puffinplot.data.MeasurementAxis
Returns a compass (field) direction corresponding to this axis.
getDirection() - Method in class net.talvi.puffinplot.data.PcaValues
Returns the direction of the principal PCA axis.
getDirection() - Method in class net.talvi.puffinplot.data.Sample
Returns the sample direction.
getDirectionNearEnd(CoreSection.End, int) - Method in class net.talvi.puffinplot.data.CoreSection
Calculates and returns the Fisherian mean direction of the topmost or bottommost samples in this section.
getDirections() - Method in class net.talvi.puffinplot.data.FisherValues
Returns a list of unit vectors representing the directions of the vectors on which these statistics were calculated.
getDirsBySample() - Method in class net.talvi.puffinplot.data.SuiteCalcs
 
getDirsBySite() - Method in class net.talvi.puffinplot.data.SuiteCalcs
 
getDiscreteId() - Method in class net.talvi.puffinplot.data.Sample
Returns the discrete ID of this sample, as determined by the discrete ID of the first TreatmentStep within the sample.
getDiscreteId() - Method in class net.talvi.puffinplot.data.TreatmentStep
For discrete samples, returns the sample identifier (name).
getDm() - Method in class net.talvi.puffinplot.data.VGP
 
getDp() - Method in class net.talvi.puffinplot.data.VGP
 
getEmptyFields() - Static method in class net.talvi.puffinplot.data.FisherValues
Returns a list of empty strings equal in length to the number of parameters.
getEmptyFields() - Static method in class net.talvi.puffinplot.data.GreatCircle
Returns a list of empty strings equal in length to the number of parameters.
getEmptyFields() - Static method in class net.talvi.puffinplot.data.GreatCircles
Returns a list of empty strings equal in length to the number of parameters.
getEmptyFields() - Static method in class net.talvi.puffinplot.data.Location
Returns a list of empty strings equal in length to the number of parameters.
getEmptyFields() - Static method in class net.talvi.puffinplot.data.MedianDestructiveField
Returns a list of empty strings equal in length to the number of parameters.
getEmptyFields() - Static method in class net.talvi.puffinplot.data.PcaAnnotated
Returns a list of empty strings equal in length to the number of parameters.
getEmptyFields() - Static method in class net.talvi.puffinplot.data.Tensor
Returns a list of empty strings equal in length to the number of parameters.
getEmptyFields() - Static method in class net.talvi.puffinplot.data.VGP
Returns a list of empty strings equal in length to the number of parameters.
getEmptySlot() - Method in class net.talvi.puffinplot.data.Line
Returns the first TreatmentStep associated with this line which was a measurement of an empty tray slot, not an actual sample.
getEndSamples(int) - Method in class net.talvi.puffinplot.data.CoreSections
Returns a set containing all the samples which are near the end of any section within this group of sections.
getEquation() - Method in class net.talvi.puffinplot.data.PcaValues
Return a Cartesian equation describing the PCA line.
getErrorCode() - Method in class net.talvi.puffinplot.data.ArasonLevi
Error codes: 0: no problem 1: convergence problem of selected solution 2: failed robustness check 3: convergence and robustness problems
getEstimate() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
 
getEstimate() - Method in interface net.talvi.puffinplot.data.SampleRpiEstimate
 
getEstimate() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getEstimateType() - Method in class net.talvi.puffinplot.window.RpiDialog
 
getEtaDir() - Method in class net.talvi.puffinplot.data.KentParams
Returns the direction of the confidence ellipse's first axis
getEtaMag() - Method in class net.talvi.puffinplot.data.KentParams
Returns the semiangle of the confidence ellipse's first axis
getExpectedDownloadSize() - Static method in class net.talvi.puffinplot.JythonJarManager
 
getExtraLines() - Method in class net.talvi.puffinplot.data.file.EmptyLoadedData
 
getExtraLines() - Method in interface net.talvi.puffinplot.data.file.LoadedData
Returns a list of non-processed raw lines from the file.
getExtraLines() - Method in class net.talvi.puffinplot.data.file.SimpleLoadedData
 
getFactorForAm() - Method in enum net.talvi.puffinplot.data.MomentUnit
 
getFactorForTesla() - Method in enum net.talvi.puffinplot.data.FieldUnit
 
getFieldUnit() - Method in class net.talvi.puffinplot.data.file.FileFormat
 
getFilesAndReorder(int) - Method in class net.talvi.puffinplot.RecentFileList
Returns a specified file-set and moves it to the top of the list.
getFilesetLongNames() - Method in class net.talvi.puffinplot.RecentFileList
Gets a list containing a long name for each fileset, intended for use in the tooltips of the recent files menu.
getFilesetNames() - Method in class net.talvi.puffinplot.RecentFileList
Gets a list containing the names of the file-sets in the file list.
getFirstGcStepLevel() - Method in class net.talvi.puffinplot.data.Sample
Returns the treatment level for the first point used in the great-circle fit.
getFirstRunNumber() - Method in class net.talvi.puffinplot.data.Sample
Returns the run number for the first treatment step in this sample.
getFisherParams() - Method in class net.talvi.puffinplot.data.Site
Returns the Fisherian parameters of the site mean direction, as calculated by Fisher statistics or great-circle analysis.
getFisherValues() - Method in class net.talvi.puffinplot.data.Sample
Returns the results of the last Fisher calculation.
getFisherValues() - Method in class net.talvi.puffinplot.data.Site
Returns the Fisher statistics (if any) calculated for this site.
getFontSize() - Method in class net.talvi.puffinplot.plots.Plot
Returns the standard font size in plot units.
getFormat() - Method in class net.talvi.puffinplot.window.TabularImportWindow
Returns the chosen format.
getFormationCorrectionMatrix(double, double) - Static method in class net.talvi.puffinplot.data.Vec3
Returns a matrix to correct a vector for a given formation orientation.
getFormattedTreatmentLevel() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the treatment level formatted as a string.
getFormAz() - Method in class net.talvi.puffinplot.data.AmsData
Returns the formation dip azimuth in degrees.
getFormAz() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's formation dip azimuth in degrees.
getFormAz() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the formation dip azimuth.
getFormDip() - Method in class net.talvi.puffinplot.data.AmsData
Returns the formation dip in degrees.
getFormDip() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's formation dip angle in degrees.
getFormDip() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the formation dip angle.
getFormStrike() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's formation strike in degrees.
getFormStrike() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the formation strike for this treatment step.
getfTest() - Method in class net.talvi.puffinplot.data.AmsData
Returns the F-test value for the sample's anisotropy measurement.
getGraphDisplay() - Method in class net.talvi.puffinplot.window.MainWindow
Returns this window's graph display.
getGreatCircle() - Method in class net.talvi.puffinplot.data.Sample
Returns the current great-circle fit for this sample, if any.
getGreatCircleLimitHeader() - Static method in class net.talvi.puffinplot.data.Site
Returns headers for information on the treatment steps used for the great-circle analysis.
getGreatCircleLimitStrings() - Method in class net.talvi.puffinplot.data.Site
Returns information on the treatment steps used for the great-circle analysis.
getGreatCircles() - Method in class net.talvi.puffinplot.data.Site
Returns the great-circle parameters (if any) calculated for this site.
getHeaderLines() - Method in class net.talvi.puffinplot.data.file.FileFormat
 
getHeaders() - Static method in class net.talvi.puffinplot.data.FisherValues
Returns the headers describing the parameters as a list of strings.
getHeaders() - Static method in class net.talvi.puffinplot.data.GreatCircle
Returns the headers describing the parameters as a list of strings.
getHeaders() - Static method in class net.talvi.puffinplot.data.GreatCircles
Returns the headers describing the parameters as a list of strings.
getHeaders() - Static method in class net.talvi.puffinplot.data.Location
Returns the headers describing the parameters as a list of strings.
getHeaders() - Static method in class net.talvi.puffinplot.data.MedianDestructiveField
Returns the headers describing the parameters as a list of strings.
getHeaders() - Static method in class net.talvi.puffinplot.data.PcaAnnotated
Returns the headers describing the parameters as a list of strings.
getHeaders() - Static method in class net.talvi.puffinplot.data.PcaValues
Returns the headers describing the parameters as a list of strings.
getHeaders() - Static method in class net.talvi.puffinplot.data.SuiteCalcs
 
getHeaders() - Static method in class net.talvi.puffinplot.data.Tensor
Returns the headers describing the parameters as a list of strings.
getHeaders() - Static method in class net.talvi.puffinplot.data.VGP
Returns the headers describing the parameters as a list of strings.
getHeading() - Method in enum net.talvi.puffinplot.data.TreatmentParameter
Returns the heading string for this field.
getHprojXaxis() - Method in interface net.talvi.puffinplot.plots.PlotParams
Returns the X axis of the Zijderveld plot's horizontal projection.
getHprojXaxis() - Method in class net.talvi.puffinplot.window.ControlPanel
Returns the X-axis of the horizontal Zijderveld plot.
getHprojYaxis() - Method in interface net.talvi.puffinplot.plots.PlotParams
Returns the Y axis of the Zijderveld plot's horizontal projection.
getHprojYaxis() - Method in class net.talvi.puffinplot.window.ControlPanel
Returns the Y-axis of the horizontal Zijderveld plot.
getIdentifier() - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
 
getIdentifier() - Method in class net.talvi.puffinplot.data.file.SimpleOptionDefinition
 
getIdOrDepth() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns sample identifier or measurement depth.
getImportedDirection() - Method in class net.talvi.puffinplot.data.Sample
Returns the imported sample direction, if any.
getIncDeg() - Method in class net.talvi.puffinplot.data.Vec3
Returns this vector's inclination in degrees.
getIncRad() - Method in class net.talvi.puffinplot.data.Vec3
Returns this vector's inclination in radians.
getIndexBySample(Sample) - Method in class net.talvi.puffinplot.data.Suite
Returns the index of a specified sample within this suite.
getInstance(PuffinApp) - Static method in class net.talvi.puffinplot.window.MainWindow
Creates and returns a new main window object.
getInstance() - Static method in class net.talvi.puffinplot.window.PuffinRenderingHints
Return a clean instance of this class.
getIntensities() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getIntensity() - Method in class net.talvi.puffinplot.data.MedianDestructiveField
Returns half of the intensity of the sample's initial magnetic moment.
getIntensity() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the magnitude of the magnetic dipole moment per unit volume in A/m.
getIrmField() - Method in class net.talvi.puffinplot.data.TreatmentStep
For IRM treatment, returns the IRM field strength in tesla.
getK() - Method in interface net.talvi.puffinplot.data.FisherParams
Returns the k-value, an estimate of the precision parameter κ.
getK() - Method in class net.talvi.puffinplot.data.FisherValues
 
getK() - Method in class net.talvi.puffinplot.data.GreatCircles
 
getKappa() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
The inverse variance is returned as an estimate of κ.
getKappa() - Method in class net.talvi.puffinplot.data.ArasonLevi
 
getLastGcStepLevel() - Method in class net.talvi.puffinplot.data.Sample
Returns the treatment level for the last point used in the great-circle fit.
getLastRunNumber() - Method in class net.talvi.puffinplot.data.Sample
Returns the run number for the last treatment step in this sample.
getLatDeg() - Method in class net.talvi.puffinplot.data.Location
 
getLatRad() - Method in class net.talvi.puffinplot.data.Location
 
getLegend() - Method in class net.talvi.puffinplot.plots.ZPlot
Returns the legend for this plot.
getLengths() - Method in class net.talvi.puffinplot.data.SensorLengths
Returns a list of string representations of the sensor lengths in the order x, y, z.
getLetter() - Method in enum net.talvi.puffinplot.plots.Direction
 
getLine() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the measurement's data-file line.
getLocation() - Method in class net.talvi.puffinplot.data.Site
 
getLocation() - Method in class net.talvi.puffinplot.data.VGP
 
getLongDeg() - Method in class net.talvi.puffinplot.data.Location
 
getLongRad() - Method in class net.talvi.puffinplot.data.Location
 
getLower() - Method in class net.talvi.puffinplot.data.SuiteCalcs.Means
 
getM() - Method in class net.talvi.puffinplot.data.GreatCircles
Returns the number of stable endpoints used in the calculation.
getMad1() - Method in class net.talvi.puffinplot.data.Eigens
 
getMad1() - Method in class net.talvi.puffinplot.data.GreatCircle
Returns the MAD1 (planar maximum angular deviation) value for the great-circle fit.
getMad1() - Method in class net.talvi.puffinplot.data.PcaValues
Returns the maximum angle of planar deviation.
getMad3() - Method in class net.talvi.puffinplot.data.Eigens
 
getMad3() - Method in class net.talvi.puffinplot.data.PcaValues
Returns the maximum angle of linear deviation.
getMagDev() - Method in class net.talvi.puffinplot.data.Sample
Returns the geomagnetic field declination at the sampling site.
getMagDev() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the local geomagnetic field declination for the sampling site.
getMagSus() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the magnetic susceptibility of the sample at this stage of treatment
getMagSusJump() - Method in class net.talvi.puffinplot.data.Sample
Returns the results of the magnetic susceptibility jump calculation, if it has been performed.
getMainMenuBar() - Method in class net.talvi.puffinplot.window.MainWindow
Returns this window's menu bar.
getMainWindow() - Method in class net.talvi.puffinplot.PuffinApp
Returns this PuffinApp's main window
getMargin() - Method in class net.talvi.puffinplot.plots.Plot
Returns the size of the margin displayed when resizing the plot.
getMargin() - Method in class net.talvi.puffinplot.plots.PlotTitle
 
getMargin() - Method in class net.talvi.puffinplot.plots.SampleParamsLegend
 
getMargin() - Method in class net.talvi.puffinplot.plots.SiteParamsLegend
 
getMargin() - Method in class net.talvi.puffinplot.plots.ZPlot.ZplotLegend
 
getMaxDepth() - Method in class net.talvi.puffinplot.data.Suite
For a continuous suite, returns the maximum depth of a sample within the suite.
getMdf() - Method in class net.talvi.puffinplot.data.Sample
Returns the results of the MDF calculation if it has been performed, or null if not.
getMean() - Method in class net.talvi.puffinplot.data.KentParams
Returns the mean direction
getMeanDirection() - Method in interface net.talvi.puffinplot.data.FisherParams
Returns the mean direction.
getMeanDirection() - Method in class net.talvi.puffinplot.data.FisherValues
 
getMeanDirection() - Method in class net.talvi.puffinplot.data.GreatCircles
Returns the best-fit mean direction for the supplied circles and directions.
getMeanDirection() - Method in class net.talvi.puffinplot.data.Site
Returns the site mean direction.
getMeanInc() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
 
getMeanInc() - Method in class net.talvi.puffinplot.data.ArasonLevi
 
getMeanRatio() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getMeasurementType() - Method in class net.talvi.puffinplot.data.file.FileFormat
 
getMeasurementType() - Method in class net.talvi.puffinplot.data.Sample
Returns the measurement type of this sample (discrete or continuous).
getMeasurementType() - Method in class net.talvi.puffinplot.data.Suite
Returns the measurement type of this suite (discrete or continuous)
getMeasurementType() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the type of this measurement (discrete or continuous).
getMeasurementType() - Method in class net.talvi.puffinplot.window.IapdImportDialog
 
getMessages() - Method in class net.talvi.puffinplot.data.file.EmptyLoadedData
 
getMessages() - Method in interface net.talvi.puffinplot.data.file.LoadedData
Returns a list of messages produced during file reading, intended for presentation to the user.
getMessages() - Method in class net.talvi.puffinplot.data.file.SimpleLoadedData
 
getMinDepth() - Method in class net.talvi.puffinplot.data.Suite
For a continuous suite, returns the minimum depth of a sample within the suite.
getMoment() - Method in class net.talvi.puffinplot.data.TreatmentStep
Strictly speaking, the name is not quite accurate: we do not deal with magnetic moment (which would be in Am2) but in magnetic dipole moment per unit volume (in A/m).
getMoment(Correction) - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the measured magnetic dipole moment per unit volume, as modified by the supplied correction.
getMomentUnit() - Method in class net.talvi.puffinplot.data.file.FileFormat
 
getN() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
 
getN() - Method in class net.talvi.puffinplot.data.ArasonLevi
 
getN() - Method in interface net.talvi.puffinplot.data.FisherParams
Returns N, the number of directions analysed.
getN() - Method in class net.talvi.puffinplot.data.FisherValues
 
getN() - Method in class net.talvi.puffinplot.data.GreatCircles
Returns the number of great circles used in the calculation.
getName() - Method in class net.talvi.puffinplot.data.AmsData
Returns the sample's name.
getName() - Method in class net.talvi.puffinplot.data.Site
 
getName() - Method in class net.talvi.puffinplot.data.Suite
Returns the name of this suite.
getName() - Method in class net.talvi.puffinplot.plots.AmsPlot
 
getName() - Method in class net.talvi.puffinplot.plots.DemagPlot
Returns this plot's internal name.
getName() - Method in class net.talvi.puffinplot.plots.DemagTable
Returns the internal plot name for this table.
getName() - Method in class net.talvi.puffinplot.plots.DepthPlot
 
getName() - Method in class net.talvi.puffinplot.plots.NrmHistogram
Returns this plot's internal name.
getName() - Method in class net.talvi.puffinplot.plots.Plot
Returns an internal name for this plot.
getName() - Method in class net.talvi.puffinplot.plots.PlotTitle
 
getName() - Method in class net.talvi.puffinplot.plots.RpiPlot
 
getName() - Method in class net.talvi.puffinplot.plots.SampleEqualAreaPlot
 
getName() - Method in class net.talvi.puffinplot.plots.SampleParamsLegend
 
getName() - Method in class net.talvi.puffinplot.plots.SampleParamsTable
 
getName() - Method in class net.talvi.puffinplot.plots.SeparateSuiteEqualAreaPlot
Returns this plot's internal name.
getName() - Method in class net.talvi.puffinplot.plots.SiteEqualAreaPlot
 
getName() - Method in class net.talvi.puffinplot.plots.SiteParamsLegend
 
getName() - Method in class net.talvi.puffinplot.plots.SiteParamsTable
 
getName() - Method in class net.talvi.puffinplot.plots.SuiteEqualAreaPlot
 
getName() - Method in class net.talvi.puffinplot.plots.SuiteParamsTable
 
getName() - Method in class net.talvi.puffinplot.plots.TernaryPlot
 
getName() - Method in class net.talvi.puffinplot.plots.VgpMap
 
getName() - Method in class net.talvi.puffinplot.plots.VgpTable
 
getName() - Method in class net.talvi.puffinplot.plots.ZPlot
 
getName() - Method in class net.talvi.puffinplot.plots.ZPlot.ZplotLegend
 
getNameOrDepth() - Method in class net.talvi.puffinplot.data.Sample
Returns the sample identifier or depth.
getNiceName() - Method in enum net.talvi.puffinplot.data.CoreSections.TargetDeclinationType
 
getNiceName() - Method in enum net.talvi.puffinplot.data.Correction.Rotation
Returns a user-friendly name for this rotation correction.
getNiceName() - Method in enum net.talvi.puffinplot.data.FileType
Returns a user-friendly name for this filetype.
getNiceName() - Method in enum net.talvi.puffinplot.data.MeasurementType
 
getNiceName() - Method in enum net.talvi.puffinplot.data.RpiEstimateType
 
getNiceName() - Method in enum net.talvi.puffinplot.data.TreatmentParameter
Returns this field's ‘nice name’ (string representation for display to user)
getNiceName() - Method in enum net.talvi.puffinplot.data.TreatmentType
Returns a user-friendly name for this treatment.
getNiceName() - Method in class net.talvi.puffinplot.plots.AmsPlot
 
getNiceName() - Method in class net.talvi.puffinplot.plots.DemagPlot
Returns this plot's user-friendly name.
getNiceName() - Method in class net.talvi.puffinplot.plots.DemagTable
Returns the user-friendly plot name for this table.
getNiceName() - Method in class net.talvi.puffinplot.plots.DepthPlot
 
getNiceName() - Method in class net.talvi.puffinplot.plots.NrmHistogram
Returns this plot's user-friendly name.
getNiceName() - Method in class net.talvi.puffinplot.plots.Plot
Returns a user-friendly name for this plot.
getNiceName() - Method in class net.talvi.puffinplot.plots.PlotTitle
 
getNiceName() - Method in class net.talvi.puffinplot.plots.RpiPlot
 
getNiceName() - Method in class net.talvi.puffinplot.plots.SampleEqualAreaPlot
 
getNiceName() - Method in class net.talvi.puffinplot.plots.SampleParamsLegend
 
getNiceName() - Method in class net.talvi.puffinplot.plots.SampleParamsTable
 
getNiceName() - Method in class net.talvi.puffinplot.plots.SiteEqualAreaPlot
 
getNiceName() - Method in class net.talvi.puffinplot.plots.SiteParamsLegend
 
getNiceName() - Method in class net.talvi.puffinplot.plots.SiteParamsTable
 
getNiceName() - Method in class net.talvi.puffinplot.plots.SuiteEqualAreaPlot
 
getNiceName() - Method in class net.talvi.puffinplot.plots.SuiteParamsTable
 
getNiceName() - Method in class net.talvi.puffinplot.plots.TernaryPlot
 
getNiceName() - Method in class net.talvi.puffinplot.plots.VgpMap
 
getNiceName() - Method in class net.talvi.puffinplot.plots.VgpTable
 
getNiceName() - Method in class net.talvi.puffinplot.plots.ZPlot
 
getNiceName() - Method in class net.talvi.puffinplot.plots.ZPlot.ZplotLegend
 
getNormalizer() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
 
getNormalizer() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getNormalizer() - Method in class net.talvi.puffinplot.window.RpiDialog
 
getNpoints() - Method in class net.talvi.puffinplot.data.PcaValues
Returns the number of points used in this PCA.
getNrm() - Method in class net.talvi.puffinplot.data.Sample
Returns the intensity of the sample's natural remanent magnetization (NRM).
getNrm() - Method in class net.talvi.puffinplot.window.RpiDialog
 
getNrmSample() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
 
getNrmSample() - Method in interface net.talvi.puffinplot.data.SampleRpiEstimate
 
getNrmSample() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getNrmSuite() - Method in class net.talvi.puffinplot.data.SuiteRpiEstimate
 
getNumberOfSteps() - Method in class net.talvi.puffinplot.data.Sample
Returns the number of treatment steps within this sample.
getNumSamples() - Method in class net.talvi.puffinplot.data.Suite
Returns the number of samples in this suite.
getOptionDefinitions() - Method in interface net.talvi.puffinplot.data.file.FileLoader
 
getOptionDefinitions() - Method in class net.talvi.puffinplot.data.file.IapdLoader
 
getOptionDefinitions() - Method in class net.talvi.puffinplot.data.file.Jr6Loader
 
getOptionDefinitions() - Method in class net.talvi.puffinplot.data.file.TabularFileLoader
 
getOptionDefinitions() - Method in class net.talvi.puffinplot.data.file.TwoGeeLoader
 
getOrigin() - Method in class net.talvi.puffinplot.data.PcaValues
Returns the origin for the PCA fit.
getPath() - Static method in class net.talvi.puffinplot.JythonJarManager
Returns the local path for the Jython jar file with the application data directory.
getPcaAnnotated() - Method in class net.talvi.puffinplot.data.Sample
Returns the annotated results of the last PCA calculation.
getPcaValues() - Method in class net.talvi.puffinplot.data.PcaAnnotated
Returns the results of the principal component analysis.
getPcaValues() - Method in class net.talvi.puffinplot.data.Sample
Returns the results of the last PCA calculation.
getPlot() - Method in class net.talvi.puffinplot.window.SuiteEqAreaWindow
Returns the single equal-area plot contained in this window's graph display.
getPlotByClass(Class) - Method in class net.talvi.puffinplot.window.GraphDisplay
Returns the plot with a specified class.
getPlotParams() - Method in class net.talvi.puffinplot.PuffinApp
 
getPlots() - Method in class net.talvi.puffinplot.window.GraphDisplay
Returns a collection of all the plots in this graph display.
getPlotSize(String) - Method in class net.talvi.puffinplot.PuffinPrefs
Gives the configured size and position for a specified plot.
getPlotSizeString() - Method in class net.talvi.puffinplot.window.GraphDisplay
Returns a string representation of all this display's plot sizes and positions.
getPoints() - Method in class net.talvi.puffinplot.data.GreatCircle
Returns the normalized points to which the great circle was fitted, if any.
getPole() - Method in class net.talvi.puffinplot.data.GreatCircle
Returns a pole to the fitted great circle.
getPrefs() - Method in class net.talvi.puffinplot.PuffinApp
Returns the preferences for this PuffinApp.
getPrefs() - Method in class net.talvi.puffinplot.PuffinPrefs
Returns the underlying Preferences object which holds the preferences.
getPreset() - Method in class net.talvi.puffinplot.data.SensorLengths
Returns the name of the preset sensor lengths, if any.
getPresetNames() - Static method in class net.talvi.puffinplot.data.SensorLengths
Returns the names of the hard-coded preset sensor lengths.
getPuffinFile() - Method in class net.talvi.puffinplot.data.Suite
Returns the name of the PuffinPlot file associated with this suite, if any.
getR() - Method in interface net.talvi.puffinplot.data.FisherParams
Returns R, the total unit vector path length.
getR() - Method in class net.talvi.puffinplot.data.FisherValues
 
getR() - Method in class net.talvi.puffinplot.data.GreatCircles
 
getR() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getRatio() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
 
getRealFields() - Static method in enum net.talvi.puffinplot.data.TreatmentParameter
Returns an unmodifiable list of the real fields.
getRealFieldStrings() - Static method in enum net.talvi.puffinplot.data.TreatmentParameter
Returns an unmodifiable list of the string representations of the real fields.
getRecentFiles() - Method in class net.talvi.puffinplot.PuffinApp
Returns the list of recently used files.
getRotation() - Method in class net.talvi.puffinplot.data.Correction
Returns the rotation correction.
getRpis() - Method in class net.talvi.puffinplot.data.SuiteRpiEstimate
 
getrSquared() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getRunNumber() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the number of the machine run during which this measurement was made.
getSampAz() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's dip azimuth in degrees.
getSampAz() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the sample's dip azimuth.
getSampDip() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's dip angle in degrees.
getSampDip() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the sample's dip angle.
getSampHade() - Method in class net.talvi.puffinplot.data.Sample
Returns this sample's hade in degrees.
getSampHade() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the sample hade for this treatment step.
getSample() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the sample of which this measurement was made.
getSample() - Method in interface net.talvi.puffinplot.plots.PlotParams
Returns the sample to plot.
getSample() - Method in interface net.talvi.puffinplot.plots.PlotPoint
 
getSampleAz() - Method in class net.talvi.puffinplot.data.AmsData
Returns the sample's dip azimuth in degrees.
getSampleByIndex(int) - Method in class net.talvi.puffinplot.data.Suite
Returns the sample with the specified index.
getSampleByName(String) - Method in class net.talvi.puffinplot.data.Suite
Returns a sample from this suite with the specified name, or null if no such sample exists.
getSampleChooser() - Method in class net.talvi.puffinplot.window.MainWindow
Returns this window's sample chooser.
getSampleCorrectionMatrix(double, double) - Static method in class net.talvi.puffinplot.data.Vec3
Returns a matrix to correct a vector for a given sample orientation.
getSampleDip() - Method in class net.talvi.puffinplot.data.AmsData
Returns the sample's dip in degrees.
getSamples() - Method in class net.talvi.puffinplot.data.CoreSection
 
getSamples() - Method in interface net.talvi.puffinplot.data.SampleGroup
 
getSamples() - Method in class net.talvi.puffinplot.data.Site
Returns the samples in this site
getSamples() - Method in class net.talvi.puffinplot.data.Suite
Returns all the samples in this suite.
getSamplesByDiscreteId(String) - Method in class net.talvi.puffinplot.data.Suite
Return the samples with a given discrete ID.
getSamplesNearEnd(CoreSection.End, int) - Method in class net.talvi.puffinplot.data.CoreSection
Returns the topmost or bottommost samples in this core section.
getSections() - Method in class net.talvi.puffinplot.data.CoreSections
Get a linked map of core sections.
getSelectedFileType() - Method in class net.talvi.puffinplot.window.FiletypeDialog
 
getSelectedSamples() - Method in interface net.talvi.puffinplot.plots.PlotParams
 
getSelectedSamples() - Method in class net.talvi.puffinplot.PuffinApp
Gets all the currently selected samples.
getSelectedSamples() - Method in class net.talvi.puffinplot.window.SampleChooser
Returns all the currently selected samples.
getSelectedSites() - Method in class net.talvi.puffinplot.PuffinApp
Gets all the sites containing any of the currently selected samples.
getSelectedTreatmentSteps() - Method in class net.talvi.puffinplot.data.Sample
Returns all the selected treatment steps within this sample.
getSelectionBitSet() - Method in class net.talvi.puffinplot.data.Sample
Returns the selected treatment step indices as a bit set.
getSensorLengths() - Method in class net.talvi.puffinplot.PuffinPrefs
Returns the effective sensor lengths for opening 2G data files.
getSeparator() - Method in class net.talvi.puffinplot.data.file.FileFormat
 
getSetting(String, String) - Method in interface net.talvi.puffinplot.plots.PlotParams
Gets the string value of a named setting.
getSettingBoolean(String, boolean) - Method in interface net.talvi.puffinplot.plots.PlotParams
Gets the boolean value of a named setting.
getShape() - Method in interface net.talvi.puffinplot.plots.PlotPoint
 
getShortcut() - Method in enum net.talvi.puffinplot.data.FileType
 
getShortName() - Method in class net.talvi.puffinplot.plots.AmsPlot
 
getShortName() - Method in class net.talvi.puffinplot.plots.EqualAreaPlot
Returns a short, human-readable name for this plot.
getShortName() - Method in class net.talvi.puffinplot.plots.SampleEqualAreaPlot
 
getShortName() - Method in class net.talvi.puffinplot.plots.SeparateSuiteEqualAreaPlot
 
getShortName() - Method in class net.talvi.puffinplot.plots.SiteEqualAreaPlot
 
getShortName() - Method in class net.talvi.puffinplot.plots.SuiteEqualAreaPlot
 
getSite() - Method in class net.talvi.puffinplot.data.Sample
Returns the site for this sample.
getSiteByName(String) - Method in class net.talvi.puffinplot.data.Suite
Returns a site with the given name, or null if this suite contains no such site.
getSiteEqAreaWindow() - Method in class net.talvi.puffinplot.PuffinApp
Returns the great-circle statistics window.
getSiteFishers() - Method in class net.talvi.puffinplot.data.Suite
Returns the results of the per-site Fisher statistics calculated by Suite.calculateSiteFishers(net.talvi.puffinplot.data.Correction).
getSites() - Method in class net.talvi.puffinplot.data.Suite
Returns the sites within this suite.
getSlope() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
 
getSlotNumber() - Method in class net.talvi.puffinplot.data.Sample
Returns the tray slot number for discrete samples.
getSlotNumber() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the number of the measurement tray slot in which the sample was measured.
getStoredException() - Method in class net.talvi.puffinplot.DownloadWorker
If an exception was thrown during the download process, this method will return it.
getStrikeDeg() - Method in class net.talvi.puffinplot.data.Vec3
Returns the strike of the plane normal to this vector
getString(String) - Method in class net.talvi.puffinplot.IdToFileMap
Return the directory associated with an identifier, as a string.
getStroke() - Method in class net.talvi.puffinplot.plots.Plot
Returns the default solid stroke style.
getSuite() - Method in class net.talvi.puffinplot.data.Sample
Returns the suite containing this sample.
getSuite() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the data suite containing this measurement.
getSuiteEqAreaWindow() - Method in class net.talvi.puffinplot.PuffinApp
Returns the suite equal-area plot window.
getSuiteMeans() - Method in class net.talvi.puffinplot.data.Suite
Returns the Fisher parameters calculated on the entire suite.
getSuiteRpiEstimate() - Method in interface net.talvi.puffinplot.plots.PlotParams
 
getSuites() - Method in class net.talvi.puffinplot.PuffinApp
Returns all the Suites currently open within this PuffinApp.
getT63() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
 
getT63() - Method in class net.talvi.puffinplot.data.ArasonLevi
 
getTableWindow() - Method in class net.talvi.puffinplot.PuffinApp
Returns the data table window.
getTau() - Method in class net.talvi.puffinplot.data.KentParams
Returns the tau value (eigenvalue of normalized mean susceptibility tensor).
getTauSigma() - Method in class net.talvi.puffinplot.data.KentParams
Returns (95% confidence region for tau)
getTemperature() - Method in class net.talvi.puffinplot.data.TreatmentStep
For thermal treatment, returns the temperature in degrees Celsius.
getTensor() - Method in class net.talvi.puffinplot.data.AmsData
Returns the sample's susceptibility tensor.
getTextAttributes() - Method in class net.talvi.puffinplot.plots.Plot
Returns this plot's standard text attributes.
getTickLength() - Method in class net.talvi.puffinplot.plots.Plot
Returns the standard length of an axis tick in plot units.
getTimestamp() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the timestamp of this measurement.
getTreatmentLevel() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns a numerical representation of the intensity of the treatment which was applied immediately before this measurement.
getTreatmentLevels() - Method in class net.talvi.puffinplot.data.Sample
Returns an array of the treatment levels in this sample.
getTreatmentLevels() - Method in class net.talvi.puffinplot.data.SuiteRpiEstimate
 
getTreatmentStep() - Method in interface net.talvi.puffinplot.plots.PlotPoint
 
getTreatmentStepByIndex(int) - Method in class net.talvi.puffinplot.data.Sample
Returns a specified treatment step from this sample.
getTreatmentStepByLevel(double) - Method in class net.talvi.puffinplot.data.Sample
Returns the first TreatmentStep in this Sample with the given treatment level.
getTreatmentStepByRunNumber(int) - Method in class net.talvi.puffinplot.data.Sample
Returns the datum with the highest run number which is less than the supplied run number.
getTreatmentStepByTypeAndLevel(Set<TreatmentType>, double) - Method in class net.talvi.puffinplot.data.Sample
Returns a TreatmentStep with a specified treatment type and level.
getTreatmentStepForPosition(Point2D) - Method in class net.talvi.puffinplot.plots.Plot
Returns the datum associated with the point at the given position, or null if no such datum exists.
getTreatmentSteps() - Method in class net.talvi.puffinplot.data.file.EmptyLoadedData
 
getTreatmentSteps() - Method in interface net.talvi.puffinplot.data.file.LoadedData
Returns the treatment steps read from the file.
getTreatmentSteps() - Method in class net.talvi.puffinplot.data.file.SimpleLoadedData
 
getTreatmentSteps() - Method in class net.talvi.puffinplot.data.Sample
Returns all the treatment steps within this sample.
getTreatmentType() - Method in class net.talvi.puffinplot.data.file.FileFormat
 
getTreatmentType() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the treatment applied before this measurement (AF, thermal, etc.).
getTreatmentType() - Method in class net.talvi.puffinplot.window.IapdImportDialog
 
getType() - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
 
getType() - Method in class net.talvi.puffinplot.data.file.SimpleOptionDefinition
 
getType() - Method in enum net.talvi.puffinplot.data.TreatmentParameter
Returns the type of this field (double, String, etc.).
getUnit() - Method in enum net.talvi.puffinplot.data.TreatmentType
The units in which this treatment is quantified.
getUnitSize() - Method in class net.talvi.puffinplot.plots.Plot
Returns the size of a plot unit in Java 2D units.
getUnitSize() - Method in interface net.talvi.puffinplot.plots.PlotParams
 
getUpper() - Method in class net.talvi.puffinplot.data.SuiteCalcs.Means
 
getValue(Map<String, Object>) - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
Returns the value of this option in a supplied option map.
getValue(TreatmentParameter) - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns a String representation of a value from a specified data field.
getValues() - Method in class net.talvi.puffinplot.data.Eigens
Returns the eigenvalues in decreasing order.
getVectors() - Method in class net.talvi.puffinplot.data.Eigens
Returns the eigenvectors in order of decreasing eigenvalue.
getVersion() - Method in class net.talvi.puffinplot.PuffinApp
Returns the version of this PuffinPlot build.
getVersionString() - Method in class net.talvi.puffinplot.Version
 
getVgp() - Method in class net.talvi.puffinplot.data.Site
 
getVgpsBySample() - Method in class net.talvi.puffinplot.data.SuiteCalcs
 
getVgpsBySite() - Method in class net.talvi.puffinplot.data.SuiteCalcs
 
getVisiblePlots() - Method in class net.talvi.puffinplot.window.GraphDisplay
Returns a list of the plots which are currently visible.
getVisibleTreatmentSteps() - Method in class net.talvi.puffinplot.data.Sample
Returns all the visible (non-hidden) treatment steps within this sample.
getVolume() - Method in class net.talvi.puffinplot.data.TreatmentStep
For discrete measurements, returns the volume of the sample.
getVprojXaxis() - Method in interface net.talvi.puffinplot.plots.PlotParams
Returns the X axis of the Zijderveld plot's vertical projection.
getVprojXaxis() - Method in class net.talvi.puffinplot.window.ControlPanel
Returns the X-axis of the vertical Zijderveld plot.
getXDrift() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the x drift correction value.
getYDrift() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the y drift correction value.
getYearRange() - Method in class net.talvi.puffinplot.Version
 
getZDrift() - Method in class net.talvi.puffinplot.data.TreatmentStep
Returns the z drift correction value.
getZetaDir() - Method in class net.talvi.puffinplot.data.KentParams
Returns the direction of the confidence ellipse's second axis
getZetaMag() - Method in class net.talvi.puffinplot.data.KentParams
Returns the semiangle of the confidence ellipse's second axis
getZRotationMatrix(double) - Static method in class net.talvi.puffinplot.data.Vec3
Returns a matrix for a rotation about the z axis.
GraphDisplay - Class in net.talvi.puffinplot.window
A graphical UI component which lays out and draws one or more plots.
GreatCircle - Class in net.talvi.puffinplot.data
This class represents a great circle, created either directly by specifying a pole direction or indirectly by giving a list of vectors.
greatCircleAnalysis - Variable in class net.talvi.puffinplot.PuffinActions
Determines a site mean through McFadden and McElhinny great-circle intersection.
greatCirclePoints(int, boolean) - Method in class net.talvi.puffinplot.data.Vec3
Returns a list of equally spaced points around a great circle having this vector as its pole.
GreatCircles - Class in net.talvi.puffinplot.data
This class represents a set of great circles and a set of directions.
guess(File) - Static method in enum net.talvi.puffinplot.data.FileType
Attempts to guess the type of a file from its name and contents.
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