- get(int) - Method in class net.talvi.puffinplot.data.CustomFields
-
Gets the value of a specified custom field.
- get(String) - Method in class net.talvi.puffinplot.IdToFileMap
-
Return the directory associated with an identifier.
- get2gProtocol() - Method in class net.talvi.puffinplot.PuffinPrefs
-
Returns the measurement protocol used when opening 2G data files.
- getA95() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
-
- getA95() - Method in class net.talvi.puffinplot.data.ArasonLevi
-
- getA95() - Method in interface net.talvi.puffinplot.data.FisherParams
-
Returns the alpha-95 value denoting the 95% confidence interval.
- getA95() - Method in class net.talvi.puffinplot.data.FisherValues
-
- getA95() - Method in class net.talvi.puffinplot.data.GreatCircles
-
- getActions() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the actions associated with this PuffinApp.
- getAfX() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For AF or ARM treatment, returns the x-axis AF field strength in tesla.
- getAfY() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For AF or ARM treatment, returns the y-axis AF field strength in tesla.
- getAfZ() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For AF or ARM treatment, returns the z-axis AF field strength in tesla.
- getAll() - Method in class net.talvi.puffinplot.data.SuiteCalcs.Means
-
- getAllSamplesInSelectedSites() - Method in interface net.talvi.puffinplot.plots.PlotParams
-
- getAllSamplesInSelectedSites() - Method in class net.talvi.puffinplot.PuffinApp
-
Gets all the samples in all the sites having at least one selected
sample.
- getAms() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's AMS tensor.
- getAmsBootstrapParams() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the parameters of the last AMS bootstrap statistics (if any)
calculated on this suite's data.
- getAmsHextParams() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the parameters of the last AMS Hext statistics (if any)
calculated on this suite's data.
- getAntiZoom() - Method in class net.talvi.puffinplot.window.GraphDisplay
-
Returns the inverse transform of the zoom transform.
- getAppDataDirectory() - Static method in class net.talvi.puffinplot.Util
-
Return a directory where PuffinPlot can store files for "internal"
use.
- getArea() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For continuous measurements, returns the cross-sectional area of the
core.
- getArmAxis() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For ARM treatment, returns the axis of the ARM field.
- getArmField() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For ARM treatment, returns the ARM bias field strength.
- getAxis(int) - Method in class net.talvi.puffinplot.data.Tensor
-
Returns one of the tensor's three principal axes as a vector.
- getAxisLabel() - Method in enum net.talvi.puffinplot.data.TreatmentType
-
Returns the axis label to use when plotting a graph involving this
treatment.
- getBuildProperty(String) - Method in class net.talvi.puffinplot.PuffinApp
-
Reads values from the build.properties
file.
- getByHeading(String) - Static method in enum net.talvi.puffinplot.data.TreatmentParameter
-
Returns the field whose heading string is the specified string, or
null
if no such field exists.
- getCentre() - Method in interface net.talvi.puffinplot.plots.PlotPoint
-
- getCirclePoints(Correction) - Method in class net.talvi.puffinplot.data.Sample
-
Returns the magnetic moment vectors used for the current great-circle
fit.
- getCircles() - Method in class net.talvi.puffinplot.data.GreatCircles
-
Returns the great circles which were originally supplied to the
constructor.
- getColumnHeader() - Method in enum net.talvi.puffinplot.data.MeasurementType
-
Returns a suitable column header for sample identifiers.
- getColumnMap() - Method in class net.talvi.puffinplot.data.file.FileFormat
-
- getColumnWidthsAsString() - Method in class net.talvi.puffinplot.data.file.FileFormat
-
- getCommaSeparatedHeader() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
-
- getCommaSeparatedHeader() - Method in interface net.talvi.puffinplot.data.SampleRpiEstimate
-
- getCommaSeparatedHeader() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getCompassDir() - Method in enum net.talvi.puffinplot.plots.Direction
-
- getComponent(MeasurementAxis) - Method in class net.talvi.puffinplot.data.Vec3
-
Returns a specified component of this vector.
- getControlPanel() - Method in class net.talvi.puffinplot.window.MainWindow
-
Returns the control panel for the plots displayed in this window.
- getCorrection() - Method in interface net.talvi.puffinplot.plots.PlotParams
-
Returns the correction to be applied to magnetic moment data.
- getCorrection() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the correction currently being applied to the data displayed
by this PuffinApp.
- getCorrection() - Method in class net.talvi.puffinplot.window.ControlPanel
-
Returns the correction to apply to magnetic moment data.
- getCreator() - Method in class net.talvi.puffinplot.data.Suite
-
Returns a string identifying the program and version which created this
suite.
- getCurrentlyPrintingSample() - Method in class net.talvi.puffinplot.window.MainGraphDisplay
-
If printing is in progress, return the sample which is currently being
printed.
- getCurrentPageFormat() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the current page format.
- getCurrentSample() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the current sample
- getCurrentSample() - Method in class net.talvi.puffinplot.PuffinApp
-
Gets the currently displayed Sample
- getCurrentSampleIndex() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the index defining the current sample.
- getCurrentSite() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the site for which data is currently being displayed.
- getCurrentSuite() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the currently displayed Suite.
- getCustomFlagNames() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the names (titles) of the custom flags for this suite.
- getCustomFlags() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's custom flags.
- getCustomNoteNames() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the names (titles) of the custom notes for this suite.
- getCustomNotes() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's custom notes.
- getDashedStroke() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns the default dashed stroke style.
- getDateString() - Method in class net.talvi.puffinplot.Version
-
- getDecDeg() - Method in class net.talvi.puffinplot.data.Vec3
-
Returns this vector's declination in degrees.
- getDecimalFormatSymbols() - Static method in class net.talvi.puffinplot.Util
-
Return symbols for formatting decimal numbers for on-screen display.
- getDecRad() - Method in class net.talvi.puffinplot.data.Vec3
-
Returns this vector's declination in radians.
- getDefaultValue() - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
-
Returns a default value for the option.
- getDefaultValue() - Method in class net.talvi.puffinplot.data.file.SimpleOptionDefinition
-
- getDefaultValue() - Method in enum net.talvi.puffinplot.data.TreatmentParameter
-
Returns this field's default value.
- getDemagLevel() - Method in class net.talvi.puffinplot.data.MedianDestructiveField
-
Returns the treatment level at which the intensity of the sample's
magnetic moment reached half of its initial value.
- getDepth() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the depth of a this sample within a continuous long core,
where applicable.
- getDepth() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For continuous measurements, returns the depth of this measurement within
the core.
- getDepthIndex() - Method in class net.talvi.puffinplot.window.SampleChooser
-
For long core suites, returns the current depth index.
- getDescription() - Method in class net.talvi.puffinplot.data.Correction
-
Returns a user-friendly string describing this correction.
- getDescription() - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
-
- getDescription() - Method in class net.talvi.puffinplot.data.file.SimpleOptionDefinition
-
- getDimensions() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns the dimensions of this plot.
- getDimensionsAsString() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns a string representation of this plot's dimensions.
- getDipDeg() - Method in class net.talvi.puffinplot.data.Vec3
-
Returns the strike of the plane normal this vector
- getDirection() - Method in enum net.talvi.puffinplot.data.MeasurementAxis
-
Returns a compass (field) direction corresponding to this axis.
- getDirection() - Method in class net.talvi.puffinplot.data.PcaValues
-
Returns the direction of the principal PCA axis.
- getDirection() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the sample direction.
- getDirectionNearEnd(CoreSection.End, int) - Method in class net.talvi.puffinplot.data.CoreSection
-
Calculates and returns the Fisherian mean direction of the
topmost or bottommost samples in this section.
- getDirections() - Method in class net.talvi.puffinplot.data.FisherValues
-
Returns a list of unit vectors representing the directions of the vectors
on which these statistics were calculated.
- getDirsBySample() - Method in class net.talvi.puffinplot.data.SuiteCalcs
-
- getDirsBySite() - Method in class net.talvi.puffinplot.data.SuiteCalcs
-
- getDiscreteId() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the discrete ID of this sample, as determined by the discrete ID
of the first TreatmentStep within the sample.
- getDiscreteId() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For discrete samples, returns the sample identifier (name).
- getDm() - Method in class net.talvi.puffinplot.data.VGP
-
- getDp() - Method in class net.talvi.puffinplot.data.VGP
-
- getEmptyFields() - Static method in class net.talvi.puffinplot.data.FisherValues
-
Returns a list of empty strings equal in length to the number of
parameters.
- getEmptyFields() - Static method in class net.talvi.puffinplot.data.GreatCircle
-
Returns a list of empty strings equal in length to the number of
parameters.
- getEmptyFields() - Static method in class net.talvi.puffinplot.data.GreatCircles
-
Returns a list of empty strings equal in length to the number of
parameters.
- getEmptyFields() - Static method in class net.talvi.puffinplot.data.Location
-
Returns a list of empty strings equal in length to the number of
parameters.
- getEmptyFields() - Static method in class net.talvi.puffinplot.data.MedianDestructiveField
-
Returns a list of empty strings equal in length to the number of
parameters.
- getEmptyFields() - Static method in class net.talvi.puffinplot.data.PcaAnnotated
-
Returns a list of empty strings equal in length to the number of
parameters.
- getEmptyFields() - Static method in class net.talvi.puffinplot.data.Tensor
-
Returns a list of empty strings equal in length to the number of
parameters.
- getEmptyFields() - Static method in class net.talvi.puffinplot.data.VGP
-
Returns a list of empty strings equal in length to the number of
parameters.
- getEmptySlot() - Method in class net.talvi.puffinplot.data.Line
-
Returns the first TreatmentStep associated with this line which was a
measurement of an empty tray slot, not an actual sample.
- getEndSamples(int) - Method in class net.talvi.puffinplot.data.CoreSections
-
Returns a set containing all the samples which are near the end
of any section within this group of sections.
- getEquation() - Method in class net.talvi.puffinplot.data.PcaValues
-
Return a Cartesian equation describing the PCA line.
- getErrorCode() - Method in class net.talvi.puffinplot.data.ArasonLevi
-
Error codes:
0: no problem
1: convergence problem of selected solution
2: failed robustness check
3: convergence and robustness problems
- getEstimate() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
-
- getEstimate() - Method in interface net.talvi.puffinplot.data.SampleRpiEstimate
-
- getEstimate() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getEstimateType() - Method in class net.talvi.puffinplot.window.RpiDialog
-
- getEtaDir() - Method in class net.talvi.puffinplot.data.KentParams
-
Returns the direction of the confidence ellipse's first axis
- getEtaMag() - Method in class net.talvi.puffinplot.data.KentParams
-
Returns the semiangle of the confidence ellipse's first axis
- getExpectedDownloadSize() - Static method in class net.talvi.puffinplot.JythonJarManager
-
- getExtraLines() - Method in class net.talvi.puffinplot.data.file.EmptyLoadedData
-
- getExtraLines() - Method in interface net.talvi.puffinplot.data.file.LoadedData
-
Returns a list of non-processed raw lines from the file.
- getExtraLines() - Method in class net.talvi.puffinplot.data.file.SimpleLoadedData
-
- getFactorForAm() - Method in enum net.talvi.puffinplot.data.MomentUnit
-
- getFactorForTesla() - Method in enum net.talvi.puffinplot.data.FieldUnit
-
- getFieldUnit() - Method in class net.talvi.puffinplot.data.file.FileFormat
-
- getFilesAndReorder(int) - Method in class net.talvi.puffinplot.RecentFileList
-
Returns a specified file-set and moves it to the top of the list.
- getFilesetLongNames() - Method in class net.talvi.puffinplot.RecentFileList
-
Gets a list containing a long name for each fileset, intended for
use in the tooltips of the recent files menu.
- getFilesetNames() - Method in class net.talvi.puffinplot.RecentFileList
-
Gets a list containing the names of the file-sets in the file list.
- getFirstGcStepLevel() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the treatment level for the first point used in the great-circle
fit.
- getFirstRunNumber() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the run number for the first treatment step in this sample.
- getFisherParams() - Method in class net.talvi.puffinplot.data.Site
-
Returns the Fisherian parameters of the site mean direction, as
calculated by Fisher statistics or great-circle analysis.
- getFisherValues() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the results of the last Fisher calculation.
- getFisherValues() - Method in class net.talvi.puffinplot.data.Site
-
Returns the Fisher statistics (if any) calculated for this site.
- getFontSize() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns the standard font size in plot units.
- getFormat() - Method in class net.talvi.puffinplot.window.TabularImportWindow
-
Returns the chosen format.
- getFormationCorrectionMatrix(double, double) - Static method in class net.talvi.puffinplot.data.Vec3
-
Returns a matrix to correct a vector for a given formation orientation.
- getFormattedTreatmentLevel() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the treatment level formatted as a string.
- getFormAz() - Method in class net.talvi.puffinplot.data.AmsData
-
Returns the formation dip azimuth in degrees.
- getFormAz() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's formation dip azimuth in degrees.
- getFormAz() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the formation dip azimuth.
- getFormDip() - Method in class net.talvi.puffinplot.data.AmsData
-
Returns the formation dip in degrees.
- getFormDip() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's formation dip angle in degrees.
- getFormDip() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the formation dip angle.
- getFormStrike() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's formation strike in degrees.
- getFormStrike() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the formation strike for this treatment step.
- getfTest() - Method in class net.talvi.puffinplot.data.AmsData
-
Returns the F-test value for the sample's anisotropy measurement.
- getGraphDisplay() - Method in class net.talvi.puffinplot.window.MainWindow
-
Returns this window's graph display.
- getGreatCircle() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the current great-circle fit for this sample, if any.
- getGreatCircleLimitHeader() - Static method in class net.talvi.puffinplot.data.Site
-
Returns headers for information on the treatment steps used for the
great-circle analysis.
- getGreatCircleLimitStrings() - Method in class net.talvi.puffinplot.data.Site
-
Returns information on the treatment steps used for the great-circle
analysis.
- getGreatCircles() - Method in class net.talvi.puffinplot.data.Site
-
Returns the great-circle parameters (if any) calculated for this site.
- getHeaderLines() - Method in class net.talvi.puffinplot.data.file.FileFormat
-
- getHeaders() - Static method in class net.talvi.puffinplot.data.FisherValues
-
Returns the headers describing the parameters as a list of strings.
- getHeaders() - Static method in class net.talvi.puffinplot.data.GreatCircle
-
Returns the headers describing the parameters as a list of strings.
- getHeaders() - Static method in class net.talvi.puffinplot.data.GreatCircles
-
Returns the headers describing the parameters as a list of strings.
- getHeaders() - Static method in class net.talvi.puffinplot.data.Location
-
Returns the headers describing the parameters as a list of strings.
- getHeaders() - Static method in class net.talvi.puffinplot.data.MedianDestructiveField
-
Returns the headers describing the parameters as a list of strings.
- getHeaders() - Static method in class net.talvi.puffinplot.data.PcaAnnotated
-
Returns the headers describing the parameters as a list of strings.
- getHeaders() - Static method in class net.talvi.puffinplot.data.PcaValues
-
Returns the headers describing the parameters as a list of strings.
- getHeaders() - Static method in class net.talvi.puffinplot.data.SuiteCalcs
-
- getHeaders() - Static method in class net.talvi.puffinplot.data.Tensor
-
Returns the headers describing the parameters as a list of strings.
- getHeaders() - Static method in class net.talvi.puffinplot.data.VGP
-
Returns the headers describing the parameters as a list of strings.
- getHeading() - Method in enum net.talvi.puffinplot.data.TreatmentParameter
-
Returns the heading string for this field.
- getHprojXaxis() - Method in interface net.talvi.puffinplot.plots.PlotParams
-
Returns the X axis of the Zijderveld plot's horizontal projection.
- getHprojXaxis() - Method in class net.talvi.puffinplot.window.ControlPanel
-
Returns the X-axis of the horizontal Zijderveld plot.
- getHprojYaxis() - Method in interface net.talvi.puffinplot.plots.PlotParams
-
Returns the Y axis of the Zijderveld plot's horizontal projection.
- getHprojYaxis() - Method in class net.talvi.puffinplot.window.ControlPanel
-
Returns the Y-axis of the horizontal Zijderveld plot.
- getIdentifier() - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
-
- getIdentifier() - Method in class net.talvi.puffinplot.data.file.SimpleOptionDefinition
-
- getIdOrDepth() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns sample identifier or measurement depth.
- getImportedDirection() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the imported sample direction, if any.
- getIncDeg() - Method in class net.talvi.puffinplot.data.Vec3
-
Returns this vector's inclination in degrees.
- getIncRad() - Method in class net.talvi.puffinplot.data.Vec3
-
Returns this vector's inclination in radians.
- getIndexBySample(Sample) - Method in class net.talvi.puffinplot.data.Suite
-
Returns the index of a specified sample within this suite.
- getInstance(PuffinApp) - Static method in class net.talvi.puffinplot.window.MainWindow
-
Creates and returns a new main window object.
- getInstance() - Static method in class net.talvi.puffinplot.window.PuffinRenderingHints
-
Return a clean instance of this class.
- getIntensities() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getIntensity() - Method in class net.talvi.puffinplot.data.MedianDestructiveField
-
Returns half of the intensity of the sample's initial magnetic moment.
- getIntensity() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the magnitude of the magnetic dipole moment per unit volume in
A/m.
- getIrmField() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For IRM treatment, returns the IRM field strength in tesla.
- getK() - Method in interface net.talvi.puffinplot.data.FisherParams
-
Returns the k-value, an estimate of the precision parameter
κ.
- getK() - Method in class net.talvi.puffinplot.data.FisherValues
-
- getK() - Method in class net.talvi.puffinplot.data.GreatCircles
-
- getKappa() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
-
The inverse variance is returned as an estimate of κ.
- getKappa() - Method in class net.talvi.puffinplot.data.ArasonLevi
-
- getLastGcStepLevel() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the treatment level for the last point used in the great-circle
fit.
- getLastRunNumber() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the run number for the last treatment step in this sample.
- getLatDeg() - Method in class net.talvi.puffinplot.data.Location
-
- getLatRad() - Method in class net.talvi.puffinplot.data.Location
-
- getLegend() - Method in class net.talvi.puffinplot.plots.ZPlot
-
Returns the legend for this plot.
- getLengths() - Method in class net.talvi.puffinplot.data.SensorLengths
-
Returns a list of string representations of the sensor lengths in the
order x, y, z.
- getLetter() - Method in enum net.talvi.puffinplot.plots.Direction
-
- getLine() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the measurement's data-file line.
- getLocation() - Method in class net.talvi.puffinplot.data.Site
-
- getLocation() - Method in class net.talvi.puffinplot.data.VGP
-
- getLongDeg() - Method in class net.talvi.puffinplot.data.Location
-
- getLongRad() - Method in class net.talvi.puffinplot.data.Location
-
- getLower() - Method in class net.talvi.puffinplot.data.SuiteCalcs.Means
-
- getM() - Method in class net.talvi.puffinplot.data.GreatCircles
-
Returns the number of stable endpoints used in the calculation.
- getMad1() - Method in class net.talvi.puffinplot.data.Eigens
-
- getMad1() - Method in class net.talvi.puffinplot.data.GreatCircle
-
Returns the MAD1 (planar maximum angular deviation) value for the
great-circle fit.
- getMad1() - Method in class net.talvi.puffinplot.data.PcaValues
-
Returns the maximum angle of planar deviation.
- getMad3() - Method in class net.talvi.puffinplot.data.Eigens
-
- getMad3() - Method in class net.talvi.puffinplot.data.PcaValues
-
Returns the maximum angle of linear deviation.
- getMagDev() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the geomagnetic field declination at the sampling site.
- getMagDev() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the local geomagnetic field declination for the sampling site.
- getMagSus() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the magnetic susceptibility of the sample at this stage of
treatment
- getMagSusJump() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the results of the magnetic susceptibility jump calculation,
if it has been performed.
- getMainMenuBar() - Method in class net.talvi.puffinplot.window.MainWindow
-
Returns this window's menu bar.
- getMainWindow() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns this PuffinApp's main window
- getMargin() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns the size of the margin displayed when resizing the plot.
- getMargin() - Method in class net.talvi.puffinplot.plots.PlotTitle
-
- getMargin() - Method in class net.talvi.puffinplot.plots.SampleParamsLegend
-
- getMargin() - Method in class net.talvi.puffinplot.plots.SiteParamsLegend
-
- getMargin() - Method in class net.talvi.puffinplot.plots.ZPlot.ZplotLegend
-
- getMaxDepth() - Method in class net.talvi.puffinplot.data.Suite
-
For a continuous suite, returns the maximum depth of a sample within the
suite.
- getMdf() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the results of the MDF calculation if it has been performed,
or null
if not.
- getMean() - Method in class net.talvi.puffinplot.data.KentParams
-
Returns the mean direction
- getMeanDirection() - Method in interface net.talvi.puffinplot.data.FisherParams
-
Returns the mean direction.
- getMeanDirection() - Method in class net.talvi.puffinplot.data.FisherValues
-
- getMeanDirection() - Method in class net.talvi.puffinplot.data.GreatCircles
-
Returns the best-fit mean direction for the supplied circles and
directions.
- getMeanDirection() - Method in class net.talvi.puffinplot.data.Site
-
Returns the site mean direction.
- getMeanInc() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
-
- getMeanInc() - Method in class net.talvi.puffinplot.data.ArasonLevi
-
- getMeanRatio() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getMeasurementType() - Method in class net.talvi.puffinplot.data.file.FileFormat
-
- getMeasurementType() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the measurement type of this sample (discrete or continuous).
- getMeasurementType() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the measurement type of this suite (discrete or continuous)
- getMeasurementType() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the type of this measurement (discrete or continuous).
- getMeasurementType() - Method in class net.talvi.puffinplot.window.IapdImportDialog
-
- getMessages() - Method in class net.talvi.puffinplot.data.file.EmptyLoadedData
-
- getMessages() - Method in interface net.talvi.puffinplot.data.file.LoadedData
-
Returns a list of messages produced during file reading, intended for
presentation to the user.
- getMessages() - Method in class net.talvi.puffinplot.data.file.SimpleLoadedData
-
- getMinDepth() - Method in class net.talvi.puffinplot.data.Suite
-
For a continuous suite, returns the minimum depth of a sample within the
suite.
- getMoment() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Strictly speaking, the name is not quite accurate: we do not deal with
magnetic moment (which would be in Am2) but in magnetic dipole
moment per unit volume (in A/m).
- getMoment(Correction) - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the measured magnetic dipole moment per unit volume, as modified
by the supplied correction.
- getMomentUnit() - Method in class net.talvi.puffinplot.data.file.FileFormat
-
- getN() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
-
- getN() - Method in class net.talvi.puffinplot.data.ArasonLevi
-
- getN() - Method in interface net.talvi.puffinplot.data.FisherParams
-
Returns N, the number of directions analysed.
- getN() - Method in class net.talvi.puffinplot.data.FisherValues
-
- getN() - Method in class net.talvi.puffinplot.data.GreatCircles
-
Returns the number of great circles used in the calculation.
- getName() - Method in class net.talvi.puffinplot.data.AmsData
-
Returns the sample's name.
- getName() - Method in class net.talvi.puffinplot.data.Site
-
- getName() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the name of this suite.
- getName() - Method in class net.talvi.puffinplot.plots.AmsPlot
-
- getName() - Method in class net.talvi.puffinplot.plots.DemagPlot
-
Returns this plot's internal name.
- getName() - Method in class net.talvi.puffinplot.plots.DemagTable
-
Returns the internal plot name for this table.
- getName() - Method in class net.talvi.puffinplot.plots.DepthPlot
-
- getName() - Method in class net.talvi.puffinplot.plots.NrmHistogram
-
Returns this plot's internal name.
- getName() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns an internal name for this plot.
- getName() - Method in class net.talvi.puffinplot.plots.PlotTitle
-
- getName() - Method in class net.talvi.puffinplot.plots.RpiPlot
-
- getName() - Method in class net.talvi.puffinplot.plots.SampleEqualAreaPlot
-
- getName() - Method in class net.talvi.puffinplot.plots.SampleParamsLegend
-
- getName() - Method in class net.talvi.puffinplot.plots.SampleParamsTable
-
- getName() - Method in class net.talvi.puffinplot.plots.SeparateSuiteEqualAreaPlot
-
Returns this plot's internal name.
- getName() - Method in class net.talvi.puffinplot.plots.SiteEqualAreaPlot
-
- getName() - Method in class net.talvi.puffinplot.plots.SiteParamsLegend
-
- getName() - Method in class net.talvi.puffinplot.plots.SiteParamsTable
-
- getName() - Method in class net.talvi.puffinplot.plots.SuiteEqualAreaPlot
-
- getName() - Method in class net.talvi.puffinplot.plots.SuiteParamsTable
-
- getName() - Method in class net.talvi.puffinplot.plots.TernaryPlot
-
- getName() - Method in class net.talvi.puffinplot.plots.VgpMap
-
- getName() - Method in class net.talvi.puffinplot.plots.VgpTable
-
- getName() - Method in class net.talvi.puffinplot.plots.ZPlot
-
- getName() - Method in class net.talvi.puffinplot.plots.ZPlot.ZplotLegend
-
- getNameOrDepth() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the sample identifier or depth.
- getNiceName() - Method in enum net.talvi.puffinplot.data.CoreSections.TargetDeclinationType
-
- getNiceName() - Method in enum net.talvi.puffinplot.data.Correction.Rotation
-
Returns a user-friendly name for this rotation correction.
- getNiceName() - Method in enum net.talvi.puffinplot.data.FileType
-
Returns a user-friendly name for this filetype.
- getNiceName() - Method in enum net.talvi.puffinplot.data.MeasurementType
-
- getNiceName() - Method in enum net.talvi.puffinplot.data.RpiEstimateType
-
- getNiceName() - Method in enum net.talvi.puffinplot.data.TreatmentParameter
-
Returns this field's ‘nice name’ (string representation for display to
user)
- getNiceName() - Method in enum net.talvi.puffinplot.data.TreatmentType
-
Returns a user-friendly name for this treatment.
- getNiceName() - Method in class net.talvi.puffinplot.plots.AmsPlot
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.DemagPlot
-
Returns this plot's user-friendly name.
- getNiceName() - Method in class net.talvi.puffinplot.plots.DemagTable
-
Returns the user-friendly plot name for this table.
- getNiceName() - Method in class net.talvi.puffinplot.plots.DepthPlot
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.NrmHistogram
-
Returns this plot's user-friendly name.
- getNiceName() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns a user-friendly name for this plot.
- getNiceName() - Method in class net.talvi.puffinplot.plots.PlotTitle
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.RpiPlot
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.SampleEqualAreaPlot
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.SampleParamsLegend
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.SampleParamsTable
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.SiteEqualAreaPlot
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.SiteParamsLegend
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.SiteParamsTable
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.SuiteEqualAreaPlot
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.SuiteParamsTable
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.TernaryPlot
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.VgpMap
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.VgpTable
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.ZPlot
-
- getNiceName() - Method in class net.talvi.puffinplot.plots.ZPlot.ZplotLegend
-
- getNormalizer() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
-
- getNormalizer() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getNormalizer() - Method in class net.talvi.puffinplot.window.RpiDialog
-
- getNpoints() - Method in class net.talvi.puffinplot.data.PcaValues
-
Returns the number of points used in this PCA.
- getNrm() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the intensity of the sample's natural remanent magnetization
(NRM).
- getNrm() - Method in class net.talvi.puffinplot.window.RpiDialog
-
- getNrmSample() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
-
- getNrmSample() - Method in interface net.talvi.puffinplot.data.SampleRpiEstimate
-
- getNrmSample() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getNrmSuite() - Method in class net.talvi.puffinplot.data.SuiteRpiEstimate
-
- getNumberOfSteps() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the number of treatment steps within this sample.
- getNumSamples() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the number of samples in this suite.
- getOptionDefinitions() - Method in interface net.talvi.puffinplot.data.file.FileLoader
-
- getOptionDefinitions() - Method in class net.talvi.puffinplot.data.file.IapdLoader
-
- getOptionDefinitions() - Method in class net.talvi.puffinplot.data.file.Jr6Loader
-
- getOptionDefinitions() - Method in class net.talvi.puffinplot.data.file.TabularFileLoader
-
- getOptionDefinitions() - Method in class net.talvi.puffinplot.data.file.TwoGeeLoader
-
- getOrigin() - Method in class net.talvi.puffinplot.data.PcaValues
-
Returns the origin for the PCA fit.
- getPath() - Static method in class net.talvi.puffinplot.JythonJarManager
-
Returns the local path for the Jython jar file with the application data
directory.
- getPcaAnnotated() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the annotated results of the last PCA calculation.
- getPcaValues() - Method in class net.talvi.puffinplot.data.PcaAnnotated
-
Returns the results of the principal component analysis.
- getPcaValues() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the results of the last PCA calculation.
- getPlot() - Method in class net.talvi.puffinplot.window.SuiteEqAreaWindow
-
Returns the single equal-area plot contained in this window's
graph display.
- getPlotByClass(Class) - Method in class net.talvi.puffinplot.window.GraphDisplay
-
Returns the plot with a specified class.
- getPlotParams() - Method in class net.talvi.puffinplot.PuffinApp
-
- getPlots() - Method in class net.talvi.puffinplot.window.GraphDisplay
-
Returns a collection of all the plots in this graph display.
- getPlotSize(String) - Method in class net.talvi.puffinplot.PuffinPrefs
-
Gives the configured size and position for a specified plot.
- getPlotSizeString() - Method in class net.talvi.puffinplot.window.GraphDisplay
-
Returns a string representation of all this display's plot sizes
and positions.
- getPoints() - Method in class net.talvi.puffinplot.data.GreatCircle
-
Returns the normalized points to which the great circle was fitted, if
any.
- getPole() - Method in class net.talvi.puffinplot.data.GreatCircle
-
Returns a pole to the fitted great circle.
- getPrefs() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the preferences for this PuffinApp.
- getPrefs() - Method in class net.talvi.puffinplot.PuffinPrefs
-
Returns the underlying Preferences
object which
holds the preferences.
- getPreset() - Method in class net.talvi.puffinplot.data.SensorLengths
-
Returns the name of the preset sensor lengths, if any.
- getPresetNames() - Static method in class net.talvi.puffinplot.data.SensorLengths
-
Returns the names of the hard-coded preset sensor lengths.
- getPuffinFile() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the name of the PuffinPlot file associated with this suite, if
any.
- getR() - Method in interface net.talvi.puffinplot.data.FisherParams
-
Returns R, the total unit vector path length.
- getR() - Method in class net.talvi.puffinplot.data.FisherValues
-
- getR() - Method in class net.talvi.puffinplot.data.GreatCircles
-
- getR() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getRatio() - Method in class net.talvi.puffinplot.data.MagSusSampleRpiEstimate
-
- getRealFields() - Static method in enum net.talvi.puffinplot.data.TreatmentParameter
-
Returns an unmodifiable list of the real fields.
- getRealFieldStrings() - Static method in enum net.talvi.puffinplot.data.TreatmentParameter
-
Returns an unmodifiable list of the string representations of the real
fields.
- getRecentFiles() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the list of recently used files.
- getRotation() - Method in class net.talvi.puffinplot.data.Correction
-
Returns the rotation correction.
- getRpis() - Method in class net.talvi.puffinplot.data.SuiteRpiEstimate
-
- getrSquared() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getRunNumber() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the number of the machine run during which this measurement was
made.
- getSampAz() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's dip azimuth in degrees.
- getSampAz() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the sample's dip azimuth.
- getSampDip() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's dip angle in degrees.
- getSampDip() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the sample's dip angle.
- getSampHade() - Method in class net.talvi.puffinplot.data.Sample
-
Returns this sample's hade in degrees.
- getSampHade() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the sample hade for this treatment step.
- getSample() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the sample of which this measurement was made.
- getSample() - Method in interface net.talvi.puffinplot.plots.PlotParams
-
Returns the sample to plot.
- getSample() - Method in interface net.talvi.puffinplot.plots.PlotPoint
-
- getSampleAz() - Method in class net.talvi.puffinplot.data.AmsData
-
Returns the sample's dip azimuth in degrees.
- getSampleByIndex(int) - Method in class net.talvi.puffinplot.data.Suite
-
Returns the sample with the specified index.
- getSampleByName(String) - Method in class net.talvi.puffinplot.data.Suite
-
Returns a sample from this suite with the specified name, or null
if no such sample exists.
- getSampleChooser() - Method in class net.talvi.puffinplot.window.MainWindow
-
Returns this window's sample chooser.
- getSampleCorrectionMatrix(double, double) - Static method in class net.talvi.puffinplot.data.Vec3
-
Returns a matrix to correct a vector for a given sample orientation.
- getSampleDip() - Method in class net.talvi.puffinplot.data.AmsData
-
Returns the sample's dip in degrees.
- getSamples() - Method in class net.talvi.puffinplot.data.CoreSection
-
- getSamples() - Method in interface net.talvi.puffinplot.data.SampleGroup
-
- getSamples() - Method in class net.talvi.puffinplot.data.Site
-
Returns the samples in this site
- getSamples() - Method in class net.talvi.puffinplot.data.Suite
-
Returns all the samples in this suite.
- getSamplesByDiscreteId(String) - Method in class net.talvi.puffinplot.data.Suite
-
Return the samples with a given discrete ID.
- getSamplesNearEnd(CoreSection.End, int) - Method in class net.talvi.puffinplot.data.CoreSection
-
Returns the topmost or bottommost samples in this core section.
- getSections() - Method in class net.talvi.puffinplot.data.CoreSections
-
Get a linked map of core sections.
- getSelectedFileType() - Method in class net.talvi.puffinplot.window.FiletypeDialog
-
- getSelectedSamples() - Method in interface net.talvi.puffinplot.plots.PlotParams
-
- getSelectedSamples() - Method in class net.talvi.puffinplot.PuffinApp
-
Gets all the currently selected samples.
- getSelectedSamples() - Method in class net.talvi.puffinplot.window.SampleChooser
-
Returns all the currently selected samples.
- getSelectedSites() - Method in class net.talvi.puffinplot.PuffinApp
-
Gets all the sites containing any of the currently selected samples.
- getSelectedTreatmentSteps() - Method in class net.talvi.puffinplot.data.Sample
-
Returns all the selected treatment steps within this sample.
- getSelectionBitSet() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the selected treatment step indices as a bit set.
- getSensorLengths() - Method in class net.talvi.puffinplot.PuffinPrefs
-
Returns the effective sensor lengths for opening 2G data files.
- getSeparator() - Method in class net.talvi.puffinplot.data.file.FileFormat
-
- getSetting(String, String) - Method in interface net.talvi.puffinplot.plots.PlotParams
-
Gets the string value of a named setting.
- getSettingBoolean(String, boolean) - Method in interface net.talvi.puffinplot.plots.PlotParams
-
Gets the boolean value of a named setting.
- getShape() - Method in interface net.talvi.puffinplot.plots.PlotPoint
-
- getShortcut() - Method in enum net.talvi.puffinplot.data.FileType
-
- getShortName() - Method in class net.talvi.puffinplot.plots.AmsPlot
-
- getShortName() - Method in class net.talvi.puffinplot.plots.EqualAreaPlot
-
Returns a short, human-readable name for this plot.
- getShortName() - Method in class net.talvi.puffinplot.plots.SampleEqualAreaPlot
-
- getShortName() - Method in class net.talvi.puffinplot.plots.SeparateSuiteEqualAreaPlot
-
- getShortName() - Method in class net.talvi.puffinplot.plots.SiteEqualAreaPlot
-
- getShortName() - Method in class net.talvi.puffinplot.plots.SuiteEqualAreaPlot
-
- getSite() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the site for this sample.
- getSiteByName(String) - Method in class net.talvi.puffinplot.data.Suite
-
Returns a site with the given name, or null
if this suite
contains no such site.
- getSiteEqAreaWindow() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the great-circle statistics window.
- getSiteFishers() - Method in class net.talvi.puffinplot.data.Suite
-
- getSites() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the sites within this suite.
- getSlope() - Method in class net.talvi.puffinplot.data.StepwiseSampleRpiEstimate
-
- getSlotNumber() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the tray slot number for discrete samples.
- getSlotNumber() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the number of the measurement tray slot in which the sample was
measured.
- getStoredException() - Method in class net.talvi.puffinplot.DownloadWorker
-
If an exception was thrown during the download process, this method will
return it.
- getStrikeDeg() - Method in class net.talvi.puffinplot.data.Vec3
-
Returns the strike of the plane normal to this vector
- getString(String) - Method in class net.talvi.puffinplot.IdToFileMap
-
Return the directory associated with an identifier, as a string.
- getStroke() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns the default solid stroke style.
- getSuite() - Method in class net.talvi.puffinplot.data.Sample
-
Returns the suite containing this sample.
- getSuite() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the data suite containing this measurement.
- getSuiteEqAreaWindow() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the suite equal-area plot window.
- getSuiteMeans() - Method in class net.talvi.puffinplot.data.Suite
-
Returns the Fisher parameters calculated on the entire suite.
- getSuiteRpiEstimate() - Method in interface net.talvi.puffinplot.plots.PlotParams
-
- getSuites() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns all the Suites currently open within this PuffinApp.
- getT63() - Method in class net.talvi.puffinplot.data.ArasonLevi.ArithMean
-
- getT63() - Method in class net.talvi.puffinplot.data.ArasonLevi
-
- getTableWindow() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the data table window.
- getTau() - Method in class net.talvi.puffinplot.data.KentParams
-
Returns the tau value (eigenvalue of normalized mean susceptibility
tensor).
- getTauSigma() - Method in class net.talvi.puffinplot.data.KentParams
-
Returns (95% confidence region for tau)
- getTemperature() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
For thermal treatment, returns the temperature in degrees Celsius.
- getTensor() - Method in class net.talvi.puffinplot.data.AmsData
-
Returns the sample's susceptibility tensor.
- getTextAttributes() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns this plot's standard text attributes.
- getTickLength() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns the standard length of an axis tick in plot units.
- getTimestamp() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the timestamp of this measurement.
- getTreatmentLevel() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns a numerical representation of the intensity of the treatment
which was applied immediately before this measurement.
- getTreatmentLevels() - Method in class net.talvi.puffinplot.data.Sample
-
Returns an array of the treatment levels in this sample.
- getTreatmentLevels() - Method in class net.talvi.puffinplot.data.SuiteRpiEstimate
-
- getTreatmentStep() - Method in interface net.talvi.puffinplot.plots.PlotPoint
-
- getTreatmentStepByIndex(int) - Method in class net.talvi.puffinplot.data.Sample
-
Returns a specified treatment step from this sample.
- getTreatmentStepByLevel(double) - Method in class net.talvi.puffinplot.data.Sample
-
Returns the first TreatmentStep in this Sample with the given treatment
level.
- getTreatmentStepByRunNumber(int) - Method in class net.talvi.puffinplot.data.Sample
-
Returns the datum with the highest run number which is less than the
supplied run number.
- getTreatmentStepByTypeAndLevel(Set<TreatmentType>, double) - Method in class net.talvi.puffinplot.data.Sample
-
Returns a TreatmentStep with a specified treatment type and level.
- getTreatmentStepForPosition(Point2D) - Method in class net.talvi.puffinplot.plots.Plot
-
Returns the datum associated with the point at the given position,
or null if no such datum exists.
- getTreatmentSteps() - Method in class net.talvi.puffinplot.data.file.EmptyLoadedData
-
- getTreatmentSteps() - Method in interface net.talvi.puffinplot.data.file.LoadedData
-
Returns the treatment steps read from the file.
- getTreatmentSteps() - Method in class net.talvi.puffinplot.data.file.SimpleLoadedData
-
- getTreatmentSteps() - Method in class net.talvi.puffinplot.data.Sample
-
Returns all the treatment steps within this sample.
- getTreatmentType() - Method in class net.talvi.puffinplot.data.file.FileFormat
-
- getTreatmentType() - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns the treatment applied before this measurement (AF, thermal,
etc.).
- getTreatmentType() - Method in class net.talvi.puffinplot.window.IapdImportDialog
-
- getType() - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
-
- getType() - Method in class net.talvi.puffinplot.data.file.SimpleOptionDefinition
-
- getType() - Method in enum net.talvi.puffinplot.data.TreatmentParameter
-
Returns the type of this field (double, String, etc.).
- getUnit() - Method in enum net.talvi.puffinplot.data.TreatmentType
-
The units in which this treatment is quantified.
- getUnitSize() - Method in class net.talvi.puffinplot.plots.Plot
-
Returns the size of a plot unit in Java 2D units.
- getUnitSize() - Method in interface net.talvi.puffinplot.plots.PlotParams
-
- getUpper() - Method in class net.talvi.puffinplot.data.SuiteCalcs.Means
-
- getValue(Map<String, Object>) - Method in interface net.talvi.puffinplot.data.file.OptionDefinition
-
Returns the value of this option in a supplied option map.
- getValue(TreatmentParameter) - Method in class net.talvi.puffinplot.data.TreatmentStep
-
Returns a String representation of a value from a specified data field.
- getValues() - Method in class net.talvi.puffinplot.data.Eigens
-
Returns the eigenvalues in decreasing order.
- getVectors() - Method in class net.talvi.puffinplot.data.Eigens
-
Returns the eigenvectors in order of decreasing eigenvalue.
- getVersion() - Method in class net.talvi.puffinplot.PuffinApp
-
Returns the version of this PuffinPlot build.
- getVersionString() - Method in class net.talvi.puffinplot.Version
-
- getVgp() - Method in class net.talvi.puffinplot.data.Site
-
- getVgpsBySample() - Method in class net.talvi.puffinplot.data.SuiteCalcs
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- getVgpsBySite() - Method in class net.talvi.puffinplot.data.SuiteCalcs
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- getVisiblePlots() - Method in class net.talvi.puffinplot.window.GraphDisplay
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Returns a list of the plots which are currently visible.
- getVisibleTreatmentSteps() - Method in class net.talvi.puffinplot.data.Sample
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Returns all the visible (non-hidden) treatment steps within this sample.
- getVolume() - Method in class net.talvi.puffinplot.data.TreatmentStep
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For discrete measurements, returns the volume of the sample.
- getVprojXaxis() - Method in interface net.talvi.puffinplot.plots.PlotParams
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Returns the X axis of the Zijderveld plot's vertical projection.
- getVprojXaxis() - Method in class net.talvi.puffinplot.window.ControlPanel
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Returns the X-axis of the vertical Zijderveld plot.
- getXDrift() - Method in class net.talvi.puffinplot.data.TreatmentStep
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Returns the x drift correction value.
- getYDrift() - Method in class net.talvi.puffinplot.data.TreatmentStep
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Returns the y drift correction value.
- getYearRange() - Method in class net.talvi.puffinplot.Version
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- getZDrift() - Method in class net.talvi.puffinplot.data.TreatmentStep
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Returns the z drift correction value.
- getZetaDir() - Method in class net.talvi.puffinplot.data.KentParams
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Returns the direction of the confidence ellipse's second axis
- getZetaMag() - Method in class net.talvi.puffinplot.data.KentParams
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Returns the semiangle of the confidence ellipse's second axis
- getZRotationMatrix(double) - Static method in class net.talvi.puffinplot.data.Vec3
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Returns a matrix for a rotation about the z axis.
- GraphDisplay - Class in net.talvi.puffinplot.window
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A graphical UI component which lays out and draws one or more plots.
- GreatCircle - Class in net.talvi.puffinplot.data
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This class represents a great circle, created either directly by
specifying a pole direction or indirectly by giving a list of
vectors.
- greatCircleAnalysis - Variable in class net.talvi.puffinplot.PuffinActions
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Determines a site mean through McFadden and McElhinny great-circle
intersection.
- greatCirclePoints(int, boolean) - Method in class net.talvi.puffinplot.data.Vec3
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Returns a list of equally spaced points around a great circle having this
vector as its pole.
- GreatCircles - Class in net.talvi.puffinplot.data
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This class represents a set of great circles and a set of directions.
- guess(File) - Static method in enum net.talvi.puffinplot.data.FileType
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Attempts to guess the type of a file from its name and contents.